Generate per comparison DEG heatmaps for a list of DESeq2 results

PlotRNAHeatmaps(res.list, rld, vsd, level, outpath, padj.thresh, fc.thresh,
  plot.annos)

Arguments

res.list

Named List containing DESeqResults objects for all comparisons generated by ProcessDEGs.

rld

A RangedSummarizedExperiment object of rlog transformed counts as returned by RunDESeq2.

vsd

A RangedSummarizedExperiment object of vst transformed counts as returned by RunDESeq2.

level

String defining variable of interest.

outpath

Path to directory to be used for output.

padj.thresh

Number indicating the adjusted p-value cutoff to be used for determining "significant" differential expression.

fc.thresh

Number indicating the log2 fold-change cutoff to be used for determining "significant" differential expression.

plot.annos

String or character vector defining the column(s) to use to annotate figures.