Package index • halfBaked

All functions

GSEA_barplot(): Plot top Gene Set Enrichment Analysis (GSEA) results in a barplot.

get_DESeq2_res(): Get DESeq2 Results

get_edgeR_res(): Get edgeR Results

get_genes_by_go_term(): Retrieve Genes Associated with GO Terms Containing a Specific Search Term

plot_clustered_terms_top(): Plot top words by frequency for reduced, clustered GO terms

run_GSEA(): Run Gene Set Enrichment Analysis (GSEA) with arbitrary gene sets.

run_enrichment(): Run Enrichment Analysis